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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1276891_1277721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1276891 - 1277721

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTAT

5'SS Class:

major

3'SS Sequence:

GCTGCTTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TATTAAGTAACC

Flanking Amino Acid:

MKIKTEPTEEMSGDLDNLDA

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

38.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

79.9

0.67

0.9

76.4

37.6

Minor 5ss

36.4

-1.5

3.7

54.5

49.7

Minor BPS

48.6

-0.1

2.4

70.15

40.5

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189