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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12778816_12780388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12778816 - 12780388

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATG

5'SS Class:

strong_major

3'SS Sequence:

ATCCCTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATCC

Flanking Amino Acid:

IEDCEYVQLQVLPSSKKNVI

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

1.1

36.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

0.8

69.4

36.2

Minor 5ss

35.7

-1.6

2.6

42.8

44.1

Minor BPS

64.4

0.43

1.6

73.08

38.7

Associated Gene:

Gene:

CASS4

Ensembl Gene ID:

ENSAPLG00000004370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004484

12778402 - 12788311

9910