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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12779587_12780388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12779587 - 12780388

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TGATTTTTAACA

Flanking Amino Acid:

IEDCEYVQLQAQKIISGKEV

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

1.1

36.1

Major BPS

0.79

0.8

83.7

25.7

Major PPT

77.3

0.61

73.5

40.5

Minor 5ss

35.7

-1.6

2.6

42.8

44.1

Minor BPS

74.6

0.77

1.1

76.5

34.2

Associated Gene:

Gene:

CASS4

Ensembl Gene ID:

ENSAPLG00000004370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039018

12777099 - 12797145

20047

ENSAPLT00000032690

12777099 - 12800493

23395