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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12783661_12784671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12783661 - 12784671

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTGGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAA

U12 Branch Point Sequence:

TTGAAGCCAACC

Flanking Amino Acid:

TQRRESLFTRSPATPPTARK

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

61.6

0.29

1.2

55.4

Major PPT

68.8

0.42

1.1

64.1

41.6

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

38.1

-0.9

2.4

53.4

43.6

Associated Gene:

Gene:

CASS4

Ensembl Gene ID:

ENSAPLG00000004370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039018

12777099 - 12797145

20047

ENSAPLT00000032690

12777099 - 12800493

23395

ENSAPLT00000004484

12778402 - 12788311

9910