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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12784777_12787764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12784777 - 12787764

Intron Length:

2988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

GTTCCCTCATTA

Flanking Amino Acid:

NERTQSSTRQHLFTLPRASR

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

84.3

26.3

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

70.7

0.47

74.8

27.6

Minor 5ss

-1.8

3.5

46.9

48.4

Minor BPS

0.06

1.8

66.25

40.1

Associated Gene:

Gene:

CASS4

Ensembl Gene ID:

ENSAPLG00000004370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039018

12777099 - 12797145

20047

ENSAPLT00000032690

12777099 - 12800493

23395

ENSAPLT00000004484

12778402 - 12788311

9910