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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1278603_1278856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278603 - 1278856

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCAT

5'SS Class:

major

3'SS Sequence:

TTCTGTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TCTTCTGTGATA

Flanking Amino Acid:

MSSHQFSPVTGMHSPMGSAS

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

40.8

Major BPS

85.7

0.89

0.8

22.2

Major PPT

74.4

0.55

68.6

41.3

Minor 5ss

34.9

-1.7

3.2

50.2

Minor BPS

54.5

0.14

69.19

38.1

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189