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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12788194_12797007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12788194 - 12797007

Intron Length:

8814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAC

U12 Branch Point Sequence:

CGTAACATAACA

Flanking Amino Acid:

MKVNNTLAKALYDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

56.5

0.16

1.1

34.4

Major PPT

88.8

0.87

0.6

81.4

30.7

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

49.6

-0

1.9

63.36

42.1

Associated Gene:

Gene:

CASS4

Ensembl Gene ID:

ENSAPLG00000004370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039018

12777099 - 12797145

20047