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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12806071_12807574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12806071 - 12807574

Intron Length:

1504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGCATATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

TTTTCCTGCATA

Flanking Amino Acid:

STGRTLVKYTGAGLSGRQVH

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

65.9

0.36

63.2

42.3

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

64.1

0.44

1.9

80.19

Associated Gene:

Gene:

CSTF1

Ensembl Gene ID:

ENSAPLG00000004391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047950

12805811 - 12812720

6910

ENSAPLT00000004534

12805811 - 12812720

6910