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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12808748_12809466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12808748 - 12809466

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTAATGCTAACT

Flanking Amino Acid:

MLAKSAMPIEVMMNETAQQN

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.4

0.64

0.9

72.4

37.4

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

-0.3

2.3

65.74

44.6

Associated Gene:

Gene:

CSTF1

Ensembl Gene ID:

ENSAPLG00000004391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047950

12805811 - 12812720

6910

ENSAPLT00000004534

12805811 - 12812720

6910