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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12809745_12811155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12809745 - 12811155

Intron Length:

1411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCAAAT

U12 Branch Point Sequence:

GAGTGTCAAATT

Flanking Amino Acid:

SEQLLHLIKLGMENDDSAVQ

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

59.5

0.24

1.2

67.3

37.8

Major PPT

87.6

0.85

0.7

85.2

28.8

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

40.1

-0.6

2.1

53.88

42.2

Associated Gene:

Gene:

CSTF1

Ensembl Gene ID:

ENSAPLG00000004391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047950

12805811 - 12812720

6910

ENSAPLT00000004534

12805811 - 12812720

6910