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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12811352_12811984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12811352 - 12811984

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTATCATAAAT

Flanking Amino Acid:

AERGRQKEGSAPPRHSLLTM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

70.1

40.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

88.1

0.86

0.8

32.8

Minor 5ss

36.1

-1.6

47.1

41.5

Minor BPS

55.1

0.24

1.8

74.71

41.6

Associated Gene:

Gene:

CSTF1

Ensembl Gene ID:

ENSAPLG00000004391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047950

12805811 - 12812720

6910