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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12812156_12812600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12812156 - 12812600

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

TGTCTCGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

CGCGCCGTGACG

Flanking Amino Acid:

PLRLPFLEADSRLPSMCGRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.8

43.8

Major BPS

48.6

-0

1.2

40.4

Major PPT

71.8

0.49

0.9

65.6

Minor 5ss

31.1

-2.2

2.6

32.7

34.9

Minor BPS

44.5

-0.5

2.2

46.56

46.6

Associated Gene:

Gene:

CSTF1

Ensembl Gene ID:

ENSAPLG00000004391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047950

12805811 - 12812720

6910