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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12815634_12816198_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12815634 - 12816198

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTACACATA

5'SS Class:

weak_major

3'SS Sequence:

AAAAAGTTCTGAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTTTACTTATCT

Flanking Amino Acid:

APAPGNSEDDAESSSKQKNE

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

64.5

41.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

44.2

-0.3

1.7

43.4

46.2

Minor 5ss

43.7

-0.7

3.2

60.8

44.3

Minor BPS

73.7

0.82

1.7

93.25

34.8

Associated Gene:

Gene:

AURKA

Ensembl Gene ID:

ENSAPLG00000004677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025472

12814750 - 12819738

4989

ENSAPLT00000004826

12814750 - 12820545

5796