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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1281617_1282415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1281617 - 1282415

Intron Length:

799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TTCCATGTAACA

Flanking Amino Acid:

ESFITRHDLSGKLVNIDTNS

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

72.5

0.56

1.1

63.4

Major PPT

70.1

0.45

65.1

39.8

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

48.3

-0.1

2.1

65.36

41.2

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821