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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12817598_12817975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12817598 - 12817975

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAGGTCGT

5'SS Class:

major

3'SS Sequence:

TTTCTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCATGCTTGACA

Flanking Amino Acid:

TKFDEQRTATYITELADALS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.2

56.9

47.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

89.8

0.9

0.7

85.1

28.4

Minor 5ss

37.5

-1.4

3.4

59.2

45.3

Minor BPS

62.9

0.4

1.8

70.96

41.4

Associated Gene:

Gene:

AURKA

Ensembl Gene ID:

ENSAPLG00000004677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004826

12814750 - 12820545

5796

ENSAPLT00000029911

12817006 - 12821682

4677

ENSAPLT00000025472

12814750 - 12819738

4989