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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1282960_1283538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1282960 - 1283538

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TCATTATAAACC

Flanking Amino Acid:

DFLKNLPKSSVNGVAWTNET

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

78.6

0.71

78.6

Major PPT

72.2

0.5

1.1

75.7

38.5

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

50.4

-0

1.9

63.68

41.8

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189