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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1283714_1284634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1283714 - 1284634

Intron Length:

921

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CATTGATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

GTCACATTGATA

Flanking Amino Acid:

KDSLGPLLLQALDGFLFVVN

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.16

0.7

89.2

23.6

Major BPS

76.2

0.65

39.8

Major PPT

66.6

0.37

63.4

Minor 5ss

25.7

-2.8

3.6

34.4

41.2

Minor BPS

0.02

1.7

61.05

38.8

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189