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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1284736_1285820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1284736 - 1285820

Intron Length:

1085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

ATCTGATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTGCTTTATG

Flanking Amino Acid:

VRQIRQIKEQGKAVSNDDDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.4

38.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

77.9

0.63

0.9

73.9

40.1

Minor 5ss

39.6

-1.2

3.6

58.4

46.5

Minor BPS

-0

2.1

64.03

43.9

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189