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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12893124_12895282_F

Intron Information:

Intron Rank:

25243

Intron Class:

major

Intron Phase:

Intron Coordinates:

12893124 - 12895282

Intron Length:

2159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

AATCAAGTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

84.4

0.77

0.8

76.5

37.6

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

40.4

-0.8

2.2

47.03

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004947

12893037 - 12900676

7640

ENSAPLT00000048390

12879097 - 12896492

17396