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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12897120_12899068_F

Intron Information:

Intron Rank:

25245

Intron Class:

major

Intron Phase:

Intron Coordinates:

12897120 - 12899068

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGAACT

5'SS Class:

major

3'SS Sequence:

CCTTGCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

ATGAACAGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

73.6

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

75.9

0.58

0.8

65.8

Minor 5ss

43.9

-0.7

2.8

59.4

38.9

Minor BPS

43.5

-0.5

1.8

52.9

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004947

12893037 - 12900676

7640