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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12900630_12903844_F

Intron Information:

Intron Rank:

25249

Intron Class:

major

Intron Phase:

Intron Coordinates:

12900630 - 12903844

Intron Length:

3215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TGTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

AATTTAAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.6

34.3

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

84.1

0.77

0.8

77.2

37.1

Minor 5ss

38.5

-1.3

3.3

54.7

43.6

Minor BPS

46.2

-0.2

1.9

66.78

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033343

12899835 - 12905314

5480