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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12968040_12988848_F

Intron Information:

Intron Rank:

140093

Intron Class:

major

Intron Phase:

Intron Coordinates:

12968040 - 12988848

Intron Length:

20809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGATTTTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

100

1.24

0.5

100

Major PPT

90.2

0.91

0.7

88.4

28.3

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

55.5

0.25

1.7

72.55

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035107

12967966 - 12989132

21167