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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12977038_12979453_R

Intron Information:

Intron Rank:

136261

Intron Class:

major

Intron Phase:

Intron Coordinates:

12977038 - 12979453

Intron Length:

2416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTTCTAAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.1

83.2

30.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

40.6

-1.1

2.6

50.9

45.5

Minor BPS

44.1

-0.3

1.9

64.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020750

12976880 - 13032769

55890

ENSAPLT00000037780

12976880 - 13034890

58011