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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12977038_13032364_R

Intron Information:

Intron Rank:

136260

Intron Class:

major

Intron Phase:

Intron Coordinates:

12977038 - 13032364

Intron Length:

55327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TGTTTCATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTTCTAAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

44.1

-0.3

1.9

64.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020732

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017931

12976880 - 13032503

55624