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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13138674_13145164_R

Intron Information:

Intron Rank:

136208

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13138674 - 13145164

Intron Length:

6491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTTG

5'SS Class:

weak_major

3'SS Sequence:

CTTTTGTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CATAGTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

41.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

78.4

0.64

82.6

32.8

Minor 5ss

62.5

0.42

2.3

72.7

44.5

Minor BPS

48.4

-0.1

1.9

58.25

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042538

13067503 - 13151806

84304