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Intron Name: Anas_platyrhynchos_platyrhynchos_21_131774_132258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

131774 - 132258

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAC

U12 Branch Point Sequence:

AGTGAGTTGACC

Flanking Amino Acid:

VNMSELVKIIRRRLQLNPTQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

43.2

Major BPS

62.5

0.31

1.1

54.8

42.1

Major PPT

76.3

0.59

0.8

66.3

35.8

Minor 5ss

30.2

-2.3

2.6

34.3

41.4

Minor BPS

44.9

-0.4

2.3

57.67

41.1

Associated Gene:

Gene:

MAP1LC3A

Ensembl Gene ID:

ENSAPLG00000013983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014566

125567 - 132421

6855