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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13243544_13249622_R

Intron Information:

Intron Rank:

137901

Intron Class:

major

Intron Phase:

Intron Coordinates:

13243544 - 13249622

Intron Length:

6079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

ACTTCAGTAGTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

81.9

26.3

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

44.4

-0.6

2.7

57.6

47.1

Minor BPS

43.8

-0.4

2.3

57.61

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025449

13242686 - 13251492

8807

ENSAPLT00000030409

13222555 - 13251492

28938