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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13272873_13273221_R

Intron Information:

Intron Rank:

153968

Intron Class:

major

Intron Phase:

Intron Coordinates:

13272873 - 13273221

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

AGGTCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

90.1

0.9

0.7

88.2

28.6

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

59.1

0.36

1.6

70.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021684

13269760 - 13273246

3487