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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13277343_13282721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13277343 - 13282721

Intron Length:

5379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGCTG

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

ACTTTCCTATCT

Flanking Amino Acid:

RLLQSVKNSMLLELKLPSGE

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

58.7

45.5

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

83.9

0.76

0.9

81.3

35.7

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

53.4

0.19

1.9

74.51

42.4

Associated Gene:

Gene:

DOK5

Ensembl Gene ID:

ENSAPLG00000004868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039442

13274647 - 13318274

43628

ENSAPLT00000036091

13275244 - 13297106

21863

ENSAPLT00000030454

13275244 - 13320197

44954

ENSAPLT00000047300

13274647 - 13300558

25912

ENSAPLT00000043297

13276437 - 13317424

40988