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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13282858_13284167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13282858 - 13284167

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

AATCTCACATTT

Flanking Amino Acid:

DPSWFTFEAGRMCDTGEGLF

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

75.7

0.58

72.5

37.6

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

41.9

-0.5

1.8

58.27

38.4

Associated Gene:

Gene:

DOK5

Ensembl Gene ID:

ENSAPLG00000004868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033886

13275244 - 13306777

31534

ENSAPLT00000042083

13277330 - 13317424

40095

ENSAPLT00000030454

13275244 - 13320197

44954

ENSAPLT00000039915

13276437 - 13317424

40988

ENSAPLT00000005041

13275244 - 13380012

104769

ENSAPLT00000039442

13274647 - 13318274

43628

ENSAPLT00000047300

13274647 - 13300558

25912

ENSAPLT00000036091

13275244 - 13297106

21863

ENSAPLT00000043297

13276437 - 13317424

40988