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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13380892_13381651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13380892 - 13381651

Intron Length:

760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCAG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CTCTACATAAGA

Flanking Amino Acid:

ETQEMLEEAKKSLQEEIEAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

62.7

43.2

Major BPS

70.2

0.5

1.1

77.2

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

-1.6

2.6

41.2

45.2

Minor BPS

47.3

-0.2

2.1

60.89

44.9

Associated Gene:

Gene:

PFDN4

Ensembl Gene ID:

ENSAPLG00000025483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045284

13380758 - 13383903

3146