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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13401864_13402059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

13401864 - 13402059

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CATTTTAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTAATA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.9

0.58

70.1

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

66.7

0.52

1.2

70.89

Associated Gene:

Gene:

CYP24A1

Ensembl Gene ID:

ENSAPLG00000005136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005358

13395006 - 13403157

8152