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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13446922_13452217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13446922 - 13452217

Intron Length:

5296

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGGAA

U12 Branch Point Sequence:

ACTGCCCCATTT

Flanking Amino Acid:

RTSNGIPPGKEIDDRNRSDL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.4

1.17

0.7

94.5

Major BPS

47.1

-0.1

1.3

43.7

39.2

Major PPT

88.6

0.87

0.6

Minor 5ss

-2.9

41.3

45.2

Minor BPS

42.2

-0.5

2.1

59.01

44.5

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006262

13445493 - 13480793

35301