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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13452377_13452943_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13452377 - 13452943

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

AAATATATTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TTTTCCTCAAAT

Flanking Amino Acid:

RSVMSFFKTLVSPSKAETKS

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

62.6

0.31

59.1

37.6

Major PPT

57.3

0.17

1.2

58.5

45.2

Minor 5ss

39.7

-1.2

3.2

53.4

44.8

Minor BPS

77.1

0.93

1.6

94.15

32.8

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006262

13445493 - 13480793

35301