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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13452989_13457107_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13452989 - 13457107

Intron Length:

4119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTACAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

AAGTACTGAACT

Flanking Amino Acid:

AETKSEPEDKGSKAEKGHGG

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

77.3

0.68

81.5

Major PPT

57.6

0.17

1.2

58.2

41.2

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

0.39

1.7

74.16

41.8

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006262

13445493 - 13480793

35301