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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13457249_13460319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13457249 - 13460319

Intron Length:

3071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

TGTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAG

U12 Branch Point Sequence:

ATTGTCAGACTT

Flanking Amino Acid:

STFSKLFRHKAAKETQQTTN

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

60.9

0.27

1.7

71.4

45.1

Major PPT

83.2

0.75

0.8

74.4

36.5

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

43.3

-0.4

1.9

63.43

41.3

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006262

13445493 - 13480793

35301