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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13460356_13460686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13460356 - 13460686

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTGTTTATTT

Flanking Amino Acid:

KETQQTTNTKSTEQQPVSSV

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.8

0.72

0.8

74.4

40.4

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

54.6

0.22

76.04

41.4

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006262

13445493 - 13480793

35301