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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13475335_13480718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13475335 - 13480718

Intron Length:

5384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

TCTTATTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

QSLGGFFKSLGSKRMSDAEV

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

67.6

33.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.8

76.1

32.2

Minor 5ss

48.2

-0.2

2.5

63.1

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

BCAS1

Ensembl Gene ID:

ENSAPLG00000006033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033513

13474923 - 13480793

5871

ENSAPLT00000006262

13445493 - 13480793

35301