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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13864542_13947823_F

Intron Information:

Intron Rank:

144272

Intron Class:

major

Intron Phase:

Intron Coordinates:

13864542 - 13947823

Intron Length:

83282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

GAGCTCTGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

78.9

0.65

0.8

31.2

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

46.1

-0.3

1.6

51.82

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017330

13863393 - 13956892

93500

ENSAPLT00000042363

13863393 - 14008626

145234

ENSAPLT00000037843

13863393 - 14027898

164506

ENSAPLT00000033174

13863393 - 13973352

109960

ENSAPLT00000029770

13863393 - 13978984

115592

ENSAPLT00000042702

13863393 - 13960772

97380