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Intron Name: Anas_platyrhynchos_platyrhynchos_21_13954487_13959772_F

Intron Information:

Intron Rank:

144296

Intron Class:

major

Intron Phase:

Intron Coordinates:

13954487 - 13959772

Intron Length:

5286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTCCTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

GGAAGCAGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.3

75.3

40.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

39.3

-1.2

2.7

48.5

40.3

Minor BPS

42.2

-0.5

2.1

57.89

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027789

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042702

13863393 - 13960772

97380