Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14072331_14077993_F

Intron Information:

Intron Rank:

149745

Intron Class:

major

Intron Phase:

Intron Coordinates:

14072331 - 14077993

Intron Length:

5663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTG

5'SS Class:

major

3'SS Sequence:

TCTGTGTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGTTTATTGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

66.4

45.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

77.6

0.62

0.9

71.5

38.4

Minor 5ss

34.2

-1.8

3.5

46.9

48.4

Minor BPS

60.2

0.3

1.6

71.02

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019793

14059715 - 14080074

20360