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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14128972_14130184_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
14128972 - 14130184
Intron Length:
1213

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGATGT
5'SS Class:
strong_major
3'SS Sequence:
TTACTACTGTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
CTTTTCTTAATT
Flanking Amino Acid:
TQKKLNCCYPGCQFKTSYGM
Intron Amino Acid Position:
153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.6
0.98
0.8
81.6
33.2
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
71.5
0.48
1
70.5
40
Minor 5ss
39.7
-1.2
3.1
56.6
47.5
Minor BPS
83.2
1.12
1
91.07
32.9

Associated Gene:

Gene:
ZFP64
Ensembl Gene ID:
ENSAPLG00000006423
Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006663
14126839 - 14136327
9489