Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14203665_14204419_F

Intron Information:

Intron Rank:

128554

Intron Class:

major

Intron Phase:

Intron Coordinates:

14203665 - 14204419

Intron Length:

755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCAGA

5'SS Class:

major

3'SS Sequence:

CTTCTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

ACCCTTTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.3

46.4

Major BPS

74.8

0.62

39.8

Major PPT

79.4

0.66

0.8

76.5

32.1

Minor 5ss

43.2

-0.7

58.2

45.9

Minor BPS

45.8

-0.3

1.4

48.57

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032158

14157346 - 14204569

47224