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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14287735_14291107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14287735 - 14291107

Intron Length:

3373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATCCATT

Flanking Amino Acid:

GALYTYWVPLGFVLAVTVIR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.3

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.9

37.2

Minor 5ss

36.1

-1.6

3.1

47.2

42.9

Minor BPS

51.7

0.13

2.2

81.49

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037459

14286756 - 14308024

21269

ENSAPLT00000019468

14286720 - 14309655

22936