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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14298956_14300236_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14298956 - 14300236

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGCTGC

5'SS Class:

weak_major

3'SS Sequence:

TGTCTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

GGTTATCTAACT

Flanking Amino Acid:

TCTQRLPTASDLLQIRSYVY

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

57.4

42.8

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

79.3

0.66

0.9

77.1

37.1

Minor 5ss

47.1

-0.3

2.9

68.8

Minor BPS

55.4

0.25

1.9

75.66

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037459

14286756 - 14308024

21269

ENSAPLT00000019468

14286720 - 14309655

22936