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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14456795_14457244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14456795 - 14457244

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAA

U12 Branch Point Sequence:

TCTGCTTTACAG

Flanking Amino Acid:

ERLSESKRAFEKMITSEALE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.2

37.4

Major BPS

52.4

0.06

1.3

55.6

40.2

Major PPT

81.9

0.72

0.8

75.3

33.2

Minor 5ss

30.7

-2.2

2.5

31.8

35.8

Minor BPS

48.7

-0.2

1.9

55.63

Associated Gene:

Gene:

ARFRP1

Ensembl Gene ID:

ENSAPLG00000014398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014998

14455074 - 14464953

9880