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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14588229_14588665_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14588229 - 14588665

Intron Length:
437

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGTTGT

5'SS Class:
major

3'SS Sequence:
GCCTCTCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
ATTGCCTTCATC

Flanking Amino Acid:
YRACSNEVLIMSEYVESVTV

Intron Amino Acid Position:
396

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.7
0.63
1.1
73.5
37.9

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
75.8
0.58
0.8
69.1
31.5

Minor 5ss
44.5
-0.6
2.9
64.2
41.4

Minor BPS
61.1
0.33
1.9
72.28
39.5

Associated Gene:

Gene:
HELZ2

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14582661 - 14604479
21819

14582661 - 14604479
21819