Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14593089_14594363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14593089 - 14594363

Intron Length:

1275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

GTTCCCTTGAGT

Flanking Amino Acid:

VMVENYENLPGREFRVIIIS

Intron Amino Acid Position:

1102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

69.2

0.43

63.8

36.8

Minor 5ss

-1.1

53.2

44.1

Minor BPS

66.9

0.61

1.7

81.88

39.4

Associated Gene:

Gene:

HELZ2

Ensembl Gene ID:

ENSAPLG00000010386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010833

14582661 - 14604479

21819

ENSAPLT00000035927

14582661 - 14604479

21819