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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1459393_1459992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1459393 - 1459992

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TTTCTACTAACT

Flanking Amino Acid:

ALKALNLIHSRPNCVNVLVT

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.7

35.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

34.2

-1.8

2.9

42.9

43.6

Minor BPS

57.7

0.32

1.9

83.5

36.6

Associated Gene:

Gene:

EYA2

Ensembl Gene ID:

ENSAPLG00000009249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028594

1454257 - 1552764

98508

ENSAPLT00000025284

1411509 - 1518739

107231

ENSAPLT00000046772

1454257 - 1552764

98508

ENSAPLT00000021341

1411509 - 1552764

141256

ENSAPLT00000044559

1411509 - 1518739

107231

ENSAPLT00000009703

1454257 - 1545787

91531

ENSAPLT00000030131

1411509 - 1518739

107231