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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1460108_1461097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1460108 - 1461097

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

GCTTCTGCAAAG

Flanking Amino Acid:

MYNTYKNNVGGLIGAPKRET

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

75.4

0.57

0.8

68.1

32.2

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

42.9

-0.6

2.2

49.28

44.5

Associated Gene:

Gene:

EYA2

Ensembl Gene ID:

ENSAPLG00000009249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021341

1411509 - 1552764

141256

ENSAPLT00000044559

1411509 - 1518739

107231

ENSAPLT00000009703

1454257 - 1545787

91531

ENSAPLT00000030131

1411509 - 1518739

107231

ENSAPLT00000028594

1454257 - 1552764

98508

ENSAPLT00000025284

1411509 - 1518739

107231

ENSAPLT00000046772

1454257 - 1552764

98508